RFLP-MAPPING OF QTLS FOR LIFE SPAN AND LIFE HISTORY

NIH RePORTER · NIH · R01 · $169,907 · view on reporter.nih.gov ↗

Abstract

We propose to establish a complete linkage map in the nematode Caenorhabditis elegans based on restriction fragment length polymorphisms (RFLPs). We intend to focus especially on those RFLPs generated by transposable elements (Tc1 and Tc2). The linkage map will then be used to map quantitative trait loci (QTLs) specifying life span and other life history traits. Subsequent integration of the RFLP map with extant physical and genetic maps will allow simultaneous positioning of QTLs onto genetic maps, making possible the directed construction of stocks showing specific variations in life span and other life history traits, and will simplify the eventual molecular characterization of genes specifying these traits. Although such positioning has been a theoretical possibility for several years, four new developments make the project feasible and of considerable importance: (1) the construction of overlapping arrays of contiguous DNA sequences or "contigs" [Coulson et al. (1988) Nature, 335:184.]; (2) an effective mathematical algorithm for assigning QTLs to various physical regions (Lander and Botstein (1989) Genetics, 121:185] which has already been used to map QTLs in the tomato [Paterson et al. (1988) Nature, 335:721); (3) the development of recombinant inbred (RI) lines in the nematode C. elegans [Johnson (1987) Proc. Natl. Acad. Sci. USA, 84:3777]; and (4) a procedure for resolving genomic restriction digests on 2-D gels that may allow the simultaneous scoring of hundreds of RFLPs [Uitterlinden et al. (1989) Proc. Natl. Acad. Sci. USA, 86:2742].

Key facts

NIH application ID
3122197
Project number
5R01AG010248-02
Recipient
UNIVERSITY OF COLORADO
SAM.gov UEI
SPVKK1RC2MZ3
Principal Investigator
Thomas E. Johnson
Activity code
R01
Funding institute
NIH
Fiscal year
1992
Award amount
$169,907
Award type
5
Project period
1991-06-01 → 1994-05-31